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酵母蛋白质网络的动力学性质

Dynamical properties of protein networks in yeast

  • 摘要: 蛋白质-蛋白质、蛋白质-DNA相互作用网络决定了细胞中各种关键功能的执行.基于芽殖酵母(budding yeast saccharomyces cerevisiae)的蛋白质-蛋白质相互作用网络数据和相关的实验文献,我们建立了调控细胞周期和生命周期(cell cycle and life cycle)的蛋白质网络,并利用离散模型研究了该网络的动力学性质.研究表明:细胞周期网络的动力学性质具有很强的稳定性,约94%的蛋白质初态将演化到对应于生物学G1基态的稳定态,使其成为惟一的全局吸引点;同时,绝大多数的初态的演化路径都通过由G1激发态到G1基态的细胞周期演化路径,使细胞周期路径成为全局性的“吸引”路径.

     

    Abstract: Protein-protein and protein-DNA interactions in living cells constitute molecular dynamic networks that govern various cellular functions. Based on recent studies of budding yeast and other related literature, we have established the protein network governing the cell cycle and life cycle processes. Here we report our dynamical analysis of the cell-cycle network of budding yeast using a discrete two-state model. Our study reveals important properties of the network: (1) almost all (~94%) initial protein states evolve to the stationary state G1, making it a global attractor; (2) the dynamical paths to G1 for these initial states are through the cell-cycle sequence, making it a globally attracting trajectory.

     

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